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| To run phast in farm: | For more info about the farm check https://wiki-lip.lip.pt/Computing/LIP_Lisbon_Farm ---- '''To run phast in farm:''' |
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| script.sh should look like: | '''To check the status of the job:''' $squeue -u marcia ---- '''If your phast is installed in your home script.sh should look like:''' |
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| ./phast -u 1 -N 10 /lstore/comp/marcia/coral/amber_mDST_test1.root -h ../hist.root | ./phast -u 1 -N 10 /lstore/comp/marcia/mDST.root -h ../hist.root #where the number after -u should be your userevent number, and here was used -N 10 to run just 10 events to test if the script runs well. As the miniDST is stored in /lstore there is no need to pass it in the INPUT, if it is stored in your home you should pass it. ---- '''If your phast is installed in /lstore script.sh should look like:''' #!/bin/bash # #SBATCH -p lipq #SBATCH --mem-per-cpu=3G # # Load environment module load root/6.18.04 /lstore/comp/marcia/phast/phast/phast -u 1 -N 10 /lstore/comp/marcia/coral/amber_mDST_test1.root |
For more info about the farm check https://wiki-lip.lip.pt/Computing/LIP_Lisbon_Farm
To run phast in farm:
$sbatch script.sh
To check the status of the job:
$squeue -u marcia
If your phast is installed in your home script.sh should look like:
#!/bin/bash
#
#SBATCH -p lipq
#SBATCH --mem-per-cpu=3G
#INPUT=/home/comp/marcia/phast
#OUTPUT=hist.root
#
# Load environment
module load root/6.18.04
cd phast
./phast -u 1 -N 10 /lstore/comp/marcia/mDST.root -h ../hist.root
#where the number after -u should be your userevent number, and here was used -N 10 to run just 10 events to test if the script runs well. As the miniDST is stored in /lstore there is no need to pass it in the INPUT, if it is stored in your home you should pass it.
If your phast is installed in /lstore script.sh should look like:
#!/bin/bash
#
#SBATCH -p lipq
#SBATCH --mem-per-cpu=3G
#
# Load environment
module load root/6.18.04
/lstore/comp/marcia/phast/phast/phast -u 1 -N 10 /lstore/comp/marcia/coral/amber_mDST_test1.root